Filamental and Obsidian

Your vault, in three dimensions, without leaving Obsidian

3D Filamental Graph is a free community plugin that gives you a quick look at the shape of your vault. The vault itself also opens in the Filamental desktop app, which is a separate thing and the larger half of this page. None of it is trying to replace anything you already do in Obsidian.

How they fit

Two applications, one folder, and nothing to migrate

  • They read the same folder. An Obsidian vault is a folder of Markdown files and so is a Filamental space, so one folder can be both at once.
  • They read the same wikilinks. The [[links]] already in your notes are read by both, and neither rewrites them.
  • They don’t conflict. Both can be open on that folder at the same time, and neither takes it off the other.
  • Importing is optional, and offered at the start. Point Filamental at a vault and it offers Import from Obsidian, which turns those wikilinks into real connections you can type and direct, and keeps the fields your notes already have. Opening it as it is takes in only the notes that have no front matter yet.
Inside Obsidian

A quick view of the shape, in a tab you already have open

Open it from the ribbon and the graph starts simulating, so notes settle into the shape of your vault rather than the shape of your folders, and clicking one opens the note. What follows is the whole plugin, which is deliberately not very much.

  • It reads what is already there. Your wikilinks, and the connections written in the front matter where a vault holds a Filamental space.
  • Positions stick. Drag a node somewhere deliberate and it is still there on Friday, saved into the vault and shared with the desktop app.
  • Colour comes from your categories. Notes carrying Filamental entity types keep their category colour.
  • A panel and a button. The sidebar shows the active note’s type and what it connects to, and one button opens the folder in Filamental.
  • Free, and desktop only. No account, no trial, no node limit.
Running in a vault tab Every note in the file list on the left is a node, every link a connection. Nothing was imported and nothing moved.
A vault open in Obsidian with the 3D Filamental Graph running in a tab. Every note in the file list on the left appears in the graph as a node, coloured by its category, joined by the links between them, with related notes clustered together rather than arranged by folder. A note is open in a side pane beside it, showing a variable-rate fertiliser programme with its properties and its prose. Three controls sit under the graph: Dark Energy, Spin, and Open in Filamental.
The same folder

One folder, and neither of us owns it

Obsidian is open on a second screen here most days, and we use it as the place knowledge goes once it has been worked out. For that job it’s excellent and none of this is aimed at it. Filamental is for the half of the work that hasn’t settled yet and eventually has to be understood by somebody who wasn’t there.

That one folder runs in both directions, which is the useful part. A vault opens in Filamental when you want to see the shape of it, and a space that has reached the end of its useful life drops into a vault, where it goes back to being notes with its structure still in the front matter.

We did it this way because it is what we wanted for our own work. Anything kept on somebody else’s server is kept on somebody else’s terms, and those terms tend to get rewritten in the direction of whoever wrote them. Let us be the paranoid ones, and you can get on with the writing.

What the desktop app adds

The plugin shows you the shape. The app is where you give it meaning.

Every connection in the quick view is a plain line, because a line is all a quick view can honestly show. It can’t tell you that one note supersedes another, or blocks it, or reports to it, which is precisely what a connection carries in the desktop app.

  • Connections that mean something. A type you name yourself, a direction and a strength, so supersedes, blocks and evidenced by stop being one grey line.
  • Categories and properties. A Person, a Decision and a Contract get their own colour and shape, with the structured facts held on the node rather than buried in prose.
  • Attachments. A file sits on the thing it concerns and opens in whatever normally opens it.
  • Publisher. Send a space to somebody who has never heard of either application.

You keep writing in Obsidian, which is very good at writing, and the structure work happens next door in the same folder.

Bringing an existing vault across

Your wikilinks become the first draft of the structure

If you want a vault to become a Filamental space rather than only be viewed as one, there’s a one-time import that matches each [[wikilink]] to the note it points at and turns it into a real connection, reporting the ones that point nowhere rather than dropping them. Typing those connections is the work, and they arrive untyped on purpose, since the import knows two notes are related and can’t know whether one supersedes the other.

That first pass is the only time a wikilink becomes a connection. After it, a link you type stays a hyperlink you can click, because a link you made while writing a sentence is a different claim from a relationship you meant to assert. Opening a plain folder takes its links in the same way, and what it writes is on the plain Markdown page.

Getting it

Two minutes, and the second half is optional

  • The plugin. In Obsidian, open Settings, then Community plugins, then Browse, and search for 3D Filamental Graph, which is the name it’s listed under, so searching for Filamental alone may not surface it. Install it, enable it, click the icon in the ribbon.
  • The application. Download it free for Windows, macOS or Linux, point it at the same folder, and carry on. Nothing to migrate, and the layout you arranged in the plugin is already there.
In the community plugin browser Search the community plugins for 3D Filamental Graph. Free, and there’s nothing to sign up for.
The 3D Filamental Graph listing inside Obsidian’s community plugin browser, marked INSTALLED, published by CosimoScott, with its version, its repository link and Options, Hotkeys, Disable, Uninstall, Copy share link and Donate buttons. Its description reads that it explores your vault as a living 3D knowledge graph inside Obsidian, that every note becomes a node and every wikilink a connection, and that physics pulls related notes together so the vault’s hidden structure reveals itself. Below that: no import, no export, no duplicate files, your markdown stays exactly where it is, and free with no account and nothing to sign up for.
What it costs

The plugin is free and most people never pay for the rest

The plugin costs nothing and always will, with no account, no trial, no node limit and no feature switched off until you pay, because there’s no paid version of it to sell you.

  • Personal, free and permanent. No account and no card. Spaces are unlimited, the bridges joining them are free, and each space holds twenty nodes, so a vault becomes several linked spaces rather than one enormous one.
  • Fifteen days with everything unlocked on first install, so the paid features are something you have used rather than a description. When it ends nothing is deleted and nothing is held hostage.
  • Professional, $120 a year or $12 a month. It buys one thing, sending a structure to somebody who doesn’t have Filamental, and most Obsidian users never need it.
Asked before installing

Six straight answers

Is the Obsidian plugin free, or is there a paid version of it?

Free with no restrictions, meaning no account, no trial, no node limit and no feature held back for a paid tier, because there’s no paid version of the plugin to sell you. It’s a quick view rather than a cut-down editor, and it stops there on purpose. The twenty-node limit people ask about belongs to the desktop application's free plan.

Do I need the Filamental desktop app to use the Obsidian plugin?

No. 3D Filamental Graph installs from the Obsidian community plugins list and runs entirely inside Obsidian, drawing your vault as a 3D physics graph in a tab. The desktop application is a separate free download reading the same folder, and it adds what a quick view can’t show: connections carrying a type and a direction, categories, properties, attachments, and sending a structure to somebody else.

Does the plugin change my vault or create duplicate files?

Your notes aren’t touched. There’s no import, no export and no second copy, and the only thing the plugin writes is a .filamental folder holding the positions you drag nodes into, so a layout you arrange is still there next time. Opening the same vault in the desktop application does one thing more, adding Filamental front matter to any note that has none and leaving your prose untouched below it.

What is the difference between a wikilink and a connector?

A wikilink says two notes are related, while a connector says how, carrying a type you name yourself, a direction and a strength. The plugin draws both as the same plain line, since a quick view can show you that two notes connect and not what the connection means, and the desktop application is where that meaning is added.

Can I use the plugin to look at an old Filamental project?

Yes, and it’s one of the two jobs the plugin exists for. A Filamental space is a folder of Markdown files, so a space you have finished with can be moved into a vault for keeping, where the notes read as notes and the plugin still draws the structure you built, coloured by category.

Does it work on Obsidian mobile?

No. The plugin is desktop only, on Windows, macOS and Linux, and Filamental is a desktop application on the same three. A 3D physics simulation over a whole vault isn’t worth pretending about on a phone, and Obsidian marks the plugin desktop only so it won’t appear as an option there.

Start inside Obsidian

Install it, open a vault, and see what shape it has been all along

Free, nothing to sign up for, and it doesn’t touch a single one of your notes.

Platforms
Win / macOS / Linux
Personal
Free, permanent
Professional
$120 / year, or $12 / month